PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX74297.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 430aa MW: 47479.2 Da PI: 8.7818

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX74297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.4e-05	31	51	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F r nL+ H r H RDX74297.1 31 CETCGKGFQRDQNLQLHRRGH 51 *******************88 PP
2	zf-C2H2	13.6	0.00019	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ RDX74297.1 105 WKCEKCSKRYAVQSDWKAHSKTC 127 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MRIFLYLHTD PEAEVIALSP KTLMATNRFL CETCGKGFQR DQNLQLHRRG HNLPWKLKQR 60 TGKEARKRVY VCPEKSCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCEKC SKRYAVQSDW 120 KAHSKTCGTR EYKCDCGTIF SRRDSFITHR AFCDALAEET ARVNASSDMN TSLGGNIGYN 180 VMGTSLGHHN LATHFPSIFK PVSSTDETSN QTSKGLPFWM GQTSSQAQET MVNSNLHEIH 240 HLGSSTSSAT IYGGNSLLQC SNLQPSNNYQ LSWVFGPKLS NNNNQELTTS TTSLPLCNTS 300 VPSLYSSQHQ PHQTPSSANM SATALLQKAA QIGATSSDPS WLGSLGLKCG NSQGQDGNNN 360 KFSDMYGSSL VLTTLGSEAD NSACDMSQMH PHKRRHVLNE ESGGGQTRDF LGVGVQNHLP 420 PFLNQRVDLI

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MRIFLYLHTD PEAEVIALSP KTLMATNRFL CETCGKGFQR DQNLQLHRRG HNLPWKLKQR  60
TGKEARKRVY VCPEKSCVHH DPSRALGDLT GIKKHFCRKH GEKKWKCEKC SKRYAVQSDW  120
KAHSKTCGTR EYKCDCGTIF SRRDSFITHR AFCDALAEET ARVNASSDMN TSLGGNIGYN  180
VMGTSLGHHN LATHFPSIFK PVSSTDETSN QTSKGLPFWM GQTSSQAQET MVNSNLHEIH  240
HLGSSTSSAT IYGGNSLLQC SNLQPSNNYQ LSWVFGPKLS NNNNQELTTS TTSLPLCNTS  300
VPSLYSSQHQ PHQTPSSANM SATALLQKAA QIGATSSDPS WLGSLGLKCG NSQGQDGNNN  360
KFSDMYGSSL VLTTLGSEAD NSACDMSQMH PHKRRHVLNE ESGGGQTRDF LGVGVQNHLP  420
PFLNQRVDLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-128	C2H2 family protein