PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX74075.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 355aa MW: 40987.5 Da PI: 7.7109

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX74075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.4	6.5e-12	47	103	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g RDX74075.1 47 SIYRGVTRHRWTGRYEAHLWDkHCWNEsQKKKGRQGAYDNEEAAAHAYDLAALKYWG 103 57*********************9987777777******************98 PP
2	AP2	51.7	2.2e-16	146	197	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g RDX74075.1 146 SKYRGVARHHHNGRWEARIGKvF---G-NKYLYLGTYATQEEAATAYDLAAIEYRG 197 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MAKKSQLRTQ KNNATNDNIL NTTNTVTTKV KRTRRSVPRD SPPQRSSIYR GVTRHRWTGR 60 YEAHLWDKHC WNESQKKKGR QGAYDNEEAA AHAYDLAALK YWGQDTILNF PLSNYLNELK 120 EMEGQSREEY IGSLRRKSSG FSRGISKYRG VARHHHNGRW EARIGKVFGN KYLYLGTYAT 180 QEEAATAYDL AAIEYRGLNA VTNFDLSRYI KWLKPNNMNN NNDQISINLT PINHNCSSNF 240 TPHPNQEQEL SLLHNQDSLN SIVEEATLVP HQPRPAGATS ALELLLQSSK FKEMMEMTSV 300 ANLSTQLESE LPQCTFPDHI QTYFEYEDSN RYEEDVMFNE LSSIVPFYHC DEFQS

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MAKKSQLRTQ KNNATNDNIL NTTNTVTTKV KRTRRSVPRD SPPQRSSIYR GVTRHRWTGR  60
YEAHLWDKHC WNESQKKKGR QGAYDNEEAA AHAYDLAALK YWGQDTILNF PLSNYLNELK  120
EMEGQSREEY IGSLRRKSSG FSRGISKYRG VARHHHNGRW EARIGKVFGN KYLYLGTYAT  180
QEEAATAYDL AAIEYRGLNA VTNFDLSRYI KWLKPNNMNN NNDQISINLT PINHNCSSNF  240
TPHPNQEQEL SLLHNQDSLN SIVEEATLVP HQPRPAGATS ALELLLQSSK FKEMMEMTSV  300
ANLSTQLESE LPQCTFPDHI QTYFEYEDSN RYEEDVMFNE LSSIVPFYHC DEFQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	4e-96	AP2 family protein