PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX72375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 217aa MW: 24969.1 Da PI: 7.8033 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61 | 2.5e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+++++ +G ++Wk++a + g++R++k+c++rw++yl RDX72375.1 15 RGAWTPEEDRKLAQCIETHGAKRWKAVAVKSGLNRCGKSCRLRWLNYL 62 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.3 | 4.1e-14 | 68 | 133 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...................tWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l RDX72375.1 68 RGNISVEEEDLILRLHKLLGNRylchctilvpskmryqlssLWSLIAGRLP-GRTDNEIKNYWNSHL 133 78999**********************************************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MAPKNDETSK RAMNRGAWTP EEDRKLAQCI ETHGAKRWKA VAVKSGLNRC GKSCRLRWLN 60 YLRPNIKRGN ISVEEEDLIL RLHKLLGNRY LCHCTILVPS KMRYQLSSLW SLIAGRLPGR 120 TDNEIKNYWN SHLCKKVNQK EEKAEASTTQ EIIGQNQNAG DNNAELENEI ATNESGNSDV 180 YFDVNEFFNF SSDEPYGFDW LNKYLELDDI PQGTKNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 3e-48 | MYB family protein |