PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX72212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 146aa MW: 16001 Da PI: 10.0486 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.8 | 1.8e-15 | 15 | 65 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GV+ ++ g ++A Ird + +kr++lg+f +a +Aaka++aa+ +l+g+ RDX72212.1 15 HYRGVSKRP-CGTYAAKIRDlHK----KKRVWLGTFSSAVDAAKAYDAAAIELRGP 65 7********.7*********873....5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MAPSEIEKSG EEEVHYRGVS KRPCGTYAAK IRDLHKKKRV WLGTFSSAVD AAKAYDAAAI 60 ELRGPHKAKT NFPIPNNLIN HHNNNAIHSS TATNPPPHVP LTNHVTCHHQ SHSSSSSAAS 120 VEKKVVLEFD LNQSPPRLRQ FNGVGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-13 | ERF family protein |