PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX72117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 233aa MW: 25638.2 Da PI: 8.6805 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.8 | 1.5e-11 | 75 | 122 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL ++l + + +K +Ka+iL Av+ + +L RDX72117.1 75 SKACREKLRRDRLNDKFVELGSILEPG---RPTKTDKAAILIDAVRMVTQL 122 5678**********************8...89**************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVSRENTNWL FDYGLIDDIP VPDATFTVPS SAFTWPPNTA NVGVDIDGSL GDSDGLKESG 60 SKKRVRSESC AVSSSKACRE KLRRDRLNDK FVELGSILEP GRPTKTDKAA ILIDAVRMVT 120 QLRGEAQKLK DNNQGLQEKI KELKAEKNEL RDEKQRLKAE KEKLEQQLKS LNAQPSFMPP 180 PAAIPAAYAA AQGQAHGNKL VPFISYPGVA MWQFMPPAAV DTSQDHVLRP PVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-82 | bHLH family protein |