PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX72023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NF-YB | ||||||||
Protein Properties | Length: 234aa MW: 25940.6 Da PI: 4.8484 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 77.8 | 1.5e-24 | 89 | 172 | 3 | 86 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86 ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c++e+r+ti+++ +l al+ lGf +y+e++ + RDX72023.1 89 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNKEERRTIAPEHVLKALGVLGFGEYIEEVYAA 172 6899***************************************************************************98654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGYVGMGENT RQGAREGKVD VNALLVCPNA REGMTEVALS LVLIHRIEKQ QHHHTHACPP 60 PCSLLQSVDS PFLYSLGAME PMDIVGKAKE DASLPKATMT KIIKEMLPPD VRVARDAQDL 120 LIECCVEFIN LISSESNEVC NKEERRTIAP EHVLKALGVL GFGEYIEEVY AAYEQHKLET 180 MQDSIKGAKW SNRAEMTEEE ALAEQQRMFA EARARMNGGA ITSKQPDADQ SLES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23090.2 | 7e-91 | NF-YB family protein |