PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX71928.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family GRF
Protein Properties Length: 609aa    MW: 65345 Da    PI: 8.4244
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX71928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.51.4e-24223266144
         WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                 d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e
  RDX71928.1 223 DPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVE 266
                 79***************************************997 PP

2QLQ53.67e-19168198232
         QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 
                 +FT aQ+ +L++Q+++yKy++a++PvPp+Ll
  RDX71928.1 168 PFTSAQWKELERQAMIYKYMMASVPVPPDLL 198
                 8*****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    
MEAKQRPRMA ATHNSIINPT STSPLSPLQH LALEGYLMGE FGVSHKEAKA TGKISSRSVV  60
GLDAKVQGPE AFHNKMTMMA HHNHHHRPFS SPSDNDSCVG DGDGPTTYMS FTNHINLVSA  120
VDAGCGAAPA PVRTLQPFDI SPYTSSTTTT TTTFKPSAGG MAASLGFPFT SAQWKELERQ  180
AMIYKYMMAS VPVPPDLLIS TTSTSRSPCM DGGFNLRLAS SNDPEPGRCR RTDGKKWRCS  240
RDVAPNHKYC ERHMHRGRPR SRKPVEVHTN TPTPTCINNN NTHQIKRARH DCNPFPTPDV  300
TVAISNPTSR KDGSSPHFLA STTTHPYLES SLSLANFGLK AANFDSVPSV SANKPPRGLD  360
WMLNGDPISL GASDSEWQSL MQNKVGMTSA SSCNNTTEPH YLNSFALYSS SGLDQQNRRH  420
PLFLNPLVPM ENLQQEKPRG FIDAWSNAES NGNTNKNPAA SIDKLTLSSL DLSMGGGAVH  480
EDMGLGNTHS ETKISLSNWL PPATWVASTP GGPLAEVLRS STVTATNEAT SNTSSPATTH  540
VESNSPLGTM VSSPSGVLQK TLASLSDSSS NSSPTVASSR ANSEMALLRF QSNLTVLSIR  600
IGIGPYCAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.11e-39GRF family protein