PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX71928.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GRF

Protein Properties

Length: 609aa MW: 65345 Da PI: 8.4244

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX71928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.4e-24	223	266	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e RDX71928.1 223 DPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVE 266 79***************************************997 PP
2	QLQ	53.6	7e-19	168	198	2	32
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 +FT aQ+ +L++Q+++yKy++a++PvPp+Ll RDX71928.1 168 PFTSAQWKELERQAMIYKYMMASVPVPPDLL 198 8*****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MEAKQRPRMA ATHNSIINPT STSPLSPLQH LALEGYLMGE FGVSHKEAKA TGKISSRSVV 60 GLDAKVQGPE AFHNKMTMMA HHNHHHRPFS SPSDNDSCVG DGDGPTTYMS FTNHINLVSA 120 VDAGCGAAPA PVRTLQPFDI SPYTSSTTTT TTTFKPSAGG MAASLGFPFT SAQWKELERQ 180 AMIYKYMMAS VPVPPDLLIS TTSTSRSPCM DGGFNLRLAS SNDPEPGRCR RTDGKKWRCS 240 RDVAPNHKYC ERHMHRGRPR SRKPVEVHTN TPTPTCINNN NTHQIKRARH DCNPFPTPDV 300 TVAISNPTSR KDGSSPHFLA STTTHPYLES SLSLANFGLK AANFDSVPSV SANKPPRGLD 360 WMLNGDPISL GASDSEWQSL MQNKVGMTSA SSCNNTTEPH YLNSFALYSS SGLDQQNRRH 420 PLFLNPLVPM ENLQQEKPRG FIDAWSNAES NGNTNKNPAA SIDKLTLSSL DLSMGGGAVH 480 EDMGLGNTHS ETKISLSNWL PPATWVASTP GGPLAEVLRS STVTATNEAT SNTSSPATTH 540 VESNSPLGTM VSSPSGVLQK TLASLSDSSS NSSPTVASSR ANSEMALLRF QSNLTVLSIR 600 IGIGPYCAG

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MEAKQRPRMA ATHNSIINPT STSPLSPLQH LALEGYLMGE FGVSHKEAKA TGKISSRSVV  60
GLDAKVQGPE AFHNKMTMMA HHNHHHRPFS SPSDNDSCVG DGDGPTTYMS FTNHINLVSA  120
VDAGCGAAPA PVRTLQPFDI SPYTSSTTTT TTTFKPSAGG MAASLGFPFT SAQWKELERQ  180
AMIYKYMMAS VPVPPDLLIS TTSTSRSPCM DGGFNLRLAS SNDPEPGRCR RTDGKKWRCS  240
RDVAPNHKYC ERHMHRGRPR SRKPVEVHTN TPTPTCINNN NTHQIKRARH DCNPFPTPDV  300
TVAISNPTSR KDGSSPHFLA STTTHPYLES SLSLANFGLK AANFDSVPSV SANKPPRGLD  360
WMLNGDPISL GASDSEWQSL MQNKVGMTSA SSCNNTTEPH YLNSFALYSS SGLDQQNRRH  420
PLFLNPLVPM ENLQQEKPRG FIDAWSNAES NGNTNKNPAA SIDKLTLSSL DLSMGGGAVH  480
EDMGLGNTHS ETKISLSNWL PPATWVASTP GGPLAEVLRS STVTATNEAT SNTSSPATTH  540
VESNSPLGTM VSSPSGVLQK TLASLSDSSS NSSPTVASSR ANSEMALLRF QSNLTVLSIR  600
IGIGPYCAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	1e-39	GRF family protein