PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX71892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB | ||||||||
Protein Properties | Length: 364aa MW: 40864.2 Da PI: 4.7326 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.6 | 5.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l+++++ G g+W++ ++ g+ R++k+c++rw +yl RDX71892.1 14 KGRWTAEEDEKLAKYIQTNGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE+ +v+ ++ +G++ W++Ia++++ gRt++++k++w+++l RDX71892.1 67 RGNISVEEENTIVKMHASFGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MGRAPCCEKV GLKKGRWTAE EDEKLAKYIQ TNGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SVEEENTIVK MHASFGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIYSFT 120 RVETQAGGGV MDSPKVTPNP SKRKGGRTSR WAMKKNKTYA QNDTRRPKQI RDAEVPSLES 180 EGPSNADVAE VGEPIREEAV VIRTPEKSLD GVEQSTDDDI LGLCQLEGIN EGSGALGFSD 240 DMLESCLPET CGAWNLSKER ESNEVVGVGG ENGRNKMASS ETSVNGESGQ WYSCSSMALG 300 FDQNWDWESL VEYNNFDESE AYNWEHRENL LTTLWEDDDW ESDAKKTGET DSQLQNDMVA 360 WLLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 6e-77 | MYB family protein |