PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX71859.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 514aa MW: 58132.8 Da PI: 7.0341

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX71859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.2	2.2e-06	4	24	4	25
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 + C+f+ar G C G++C F+H RDX71859.1 4 RVCKFYAR-GACLKGEQCDFSH 24 68****.*********** PP
2	zf-CCCH	27.5	5.3e-09	29	50	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 +C+++++ G C yG+rC++ H+ RDX71859.1 29 DICSYYQK-GLCAYGSRCRYKHV 50 68****.***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MSNRVCKFYA RGACLKGEQC DFSHERKDDI CSYYQKGLCA YGSRCRYKHV KASQASSSAN 60 GHQSPVLDSV VSHSTRGMSS WVPKAGKSSS LDKRVRSSQH KNLASLGIDV GESSTSSVIP 120 SERLFCAFAA ANCPLGDKCS RVHGNQCLYC RKFCLHPTDR KEKENHLRTC EKKENYLQAL 180 KDSQEVECNV CLERVLSKPK PSDCKFGLLP ECDHAFCLSC IRNWRNSAPT SGMDFNNTAN 240 TVRTCPVCRK LSYFVIPSGI WYSTKEEKQE IIDNYKANCK LIDCKHFNFG NGNCPFGISC 300 FYKHTVKPGS YTWIHNRPPP QRRQNNFDMY DMLDILSDVD LSSAEYYSIM RDSDFFDDMD 360 PFEMMAMSDR LAGESGPCLG PFDSDEEDMD IFQMAALSEA LGSGVDDFGP EDFDGEEFNP 420 MEAAFLSMMM HSNIEEDDEE DNQVSKVGNI IHRVGKILHF KHINRVGYIR HRIETVGYIR 480 IFLIASRRGM LISTILNIFS NSSSVSNFLA RTVR

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MSNRVCKFYA RGACLKGEQC DFSHERKDDI CSYYQKGLCA YGSRCRYKHV KASQASSSAN  60
GHQSPVLDSV VSHSTRGMSS WVPKAGKSSS LDKRVRSSQH KNLASLGIDV GESSTSSVIP  120
SERLFCAFAA ANCPLGDKCS RVHGNQCLYC RKFCLHPTDR KEKENHLRTC EKKENYLQAL  180
KDSQEVECNV CLERVLSKPK PSDCKFGLLP ECDHAFCLSC IRNWRNSAPT SGMDFNNTAN  240
TVRTCPVCRK LSYFVIPSGI WYSTKEEKQE IIDNYKANCK LIDCKHFNFG NGNCPFGISC  300
FYKHTVKPGS YTWIHNRPPP QRRQNNFDMY DMLDILSDVD LSSAEYYSIM RDSDFFDDMD  360
PFEMMAMSDR LAGESGPCLG PFDSDEEDMD IFQMAALSEA LGSGVDDFGP EDFDGEEFNP  420
MEAAFLSMMM HSNIEEDDEE DNQVSKVGNI IHRVGKILHF KHINRVGYIR HRIETVGYIR  480
IFLIASRRGM LISTILNIFS NSSSVSNFLA RTVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08505.1	1e-107	C3H family protein