PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX71552.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 715aa    MW: 79196.3 Da    PI: 6.6675
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX71552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.11.7e-192580156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++ +++t++q+++Le++F+++++p++++r +L+++l+L  rq+k+WFqNrR+++k
  RDX71552.1 25 KKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELNLAPRQIKFWFQNRRTQMK 80
                678899***********************************************998 PP
2START164.57.8e-522274492206
                 HHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGG...CT-TT-SEEEEEEEECTT CS
       START   2 laeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddke...qWdetlakaetlevissg 88 
                 +a  a++e +++ + +ep+W++ +   + ++ d++ + f+++++       ++ea+r+sgvv+m+  +lv  ++d ++    + + ++ a t+e+issg
  RDX71552.1 227 IASNAMAEMIRLLQTNEPLWMRGAdgrDVLDLDTYERMFPKGNShlknpnVHIEASRDSGVVIMNGLTLVDMFMDPNKymeLFPTIVTMARTIEAISSG 325
                 67889*******************999999*********99999********************************977777777777*********** PP

                 ......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HH CS
       START  89 ......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hw 179
                       g lqlm+ elq+lsplv+ R+f+f+Ry++q  + +w+ivdvS d +q+++  ++  R+++lpSg  i++++ng+skv w+ehv+ ++++p h 
  RDX71552.1 326 mmgghsGSLQLMYEELQVLSPLVStREFYFLRYCQQ-IEQGWAIVDVSYDFPQDNQ-FAPQFRCHRLPSGVFIQDMPNGYSKVAWIEHVEIEDKTPvHR 422
                 ************************************.8889**************9.8***************************************** PP

                 HHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 180 llrslvksglaegaktwvatlqrqcek 206
                 l+r ++ sg+a+ga++w+ tlqr ce+
  RDX71552.1 423 LYRNIIYSGIAFGAQRWLTTLQRMCER 449
                 *************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MEYGSGSPGD HHHHHDGSSD SQRRKKRYHR HTANQIQRLE SMFKECPHPD EKQRLQLSRE  60
LNLAPRQIKF WFQNRRTQMK ALLIFFITDN CALRAENDKI RCENIAIREA LKNVICPSCG  120
GPPLNDDCYF DEQKLRLENA QLKEELDRVS SIAAKYIGRP ISQLPPVQPI HISPLDLSMG  180
SMLSQGLGGP SLDLDLLPGS SSSSMPNMPP YQPACLSDMD KSLMSDIASN AMAEMIRLLQ  240
TNEPLWMRGA DGRDVLDLDT YERMFPKGNS HLKNPNVHIE ASRDSGVVIM NGLTLVDMFM  300
DPNKYMELFP TIVTMARTIE AISSGMMGGH SGSLQLMYEE LQVLSPLVST REFYFLRYCQ  360
QIEQGWAIVD VSYDFPQDNQ FAPQFRCHRL PSGVFIQDMP NGYSKVAWIE HVEIEDKTPV  420
HRLYRNIIYS GIAFGAQRWL TTLQRMCERI ACQMVTGNST RDLGGVIPSP EGKRSMMKLA  480
QRMVTNFCAS ISASAGHRWT TLSGMNEIGV RVTVHKSTDP GQPNGVVLSA ATTIWLPIPP  540
QTVFDFFKDE RKRPQWDVLS NGNAVQEVAH IANGPHHGNC ISVLRAFNTS QNNMLILQES  600
CVDSSGSLVV YCPVDLPAIN IAMSGEDPSY IPLLPSGFTI SPDGQADQDG GGASTSTSTS  660
RIMGGSGGSL ITVAFQILVS SLPSAKLNME SVTTVNSLIG NTVQQIKAAL NCPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein