PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX71007.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 357aa MW: 39818.7 Da PI: 8.0756

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX71007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.5	4.2e-06	18	61	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvv 40 +r+C+ +++ + l+C+ ++ lC C + H Ht++ RDX71007.1 18 QRTCDYCGDFTALLYCRADSAKLCLFCDRKVH-FpnqlfskHTRS 61 789****99****************999.445577777765 PP
2	zf-B_box	20.6	9.5e-07	61	100	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.....H 37 + C+ + + +++l C + ++ lC++C ++H+ H RDX71007.1 61 SQLCDVCADSPASLLCSTHNSVLCQNCDCQTHNHalsppH 100 678*****************************44555555 PP
3	CCT	64.2	4e-22	311	354	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ allRY+eK+ktR+++K+irYesRK++AesR R+KGrFvk + RDX71007.1 311 RDSALLRYREKKKTRRYDKHIRYESRKVRAESRMRIKGRFVKDE 354 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MSGSPNPNPN SNPNPKPQRT CDYCGDFTAL LYCRADSAKL CLFCDRKVHF PNQLFSKHTR 60 SQLCDVCADS PASLLCSTHN SVLCQNCDCQ THNHALSPPH QRTPLHGFSG CPSVPHLLTI 120 LGLSEKSLLP TSQIQPLSDF HVWNAPASVG LQDFIASTPS SHKNRKGACG RQKEEILSQV 180 RELIKLEPGL IHGQVDAERQ VQYGNLSTGF ERDVEANMFP SYESSTAEIP NMQAGVFCWH 240 GESSDPANQI VPSDTSLRDY GLLVSAEDPS FTIPGTHANC NNQGKPSNSF HAENLSPTPK 300 PTPHELTSHE RDSALLRYRE KKKTRRYDKH IRYESRKVRA ESRMRIKGRF VKDETQK

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MSGSPNPNPN SNPNPKPQRT CDYCGDFTAL LYCRADSAKL CLFCDRKVHF PNQLFSKHTR  60
SQLCDVCADS PASLLCSTHN SVLCQNCDCQ THNHALSPPH QRTPLHGFSG CPSVPHLLTI  120
LGLSEKSLLP TSQIQPLSDF HVWNAPASVG LQDFIASTPS SHKNRKGACG RQKEEILSQV  180
RELIKLEPGL IHGQVDAERQ VQYGNLSTGF ERDVEANMFP SYESSTAEIP NMQAGVFCWH  240
GESSDPANQI VPSDTSLRDY GLLVSAEDPS FTIPGTHANC NNQGKPSNSF HAENLSPTPK  300
PTPHELTSHE RDSALLRYRE KKKTRRYDKH IRYESRKVRA ESRMRIKGRF VKDETQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	3e-74	CO-like family protein