PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX70925.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 665aa MW: 73918.6 Da PI: 4.7087

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX70925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	4e-14	462	508	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ RDX70925.1 462 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 508 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MAAPLGCRLQ SMLQAAVQSV HWTYSLFWQL CPQQVILVWG DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGETNPPTRR PCAALSPEDL TESEWFYLMC VSFSFPPGVG 120 LPGKAYARRQ HVWLTGANEA DSKTFSRAIL AKTVVCIPLL DGVVEFGTTD KVQEDLNFIQ 180 HVKSFFIDQL NTLPPKPALS EHSTSNPTSS SDHIPAVMYT VADPPAANPS QNDDMDEEEE 240 EEEEEEEEEE EEEEEEEEEE EEESGSDEET GGRIGRRGST PNMAAEASEL MQLEMPEEIR 300 VGSPNDGSNN LDSDFHLLAV SQGGNAAGQA ESTRRWGTSQ DALQVQLPAS ALHPLEDLTQ 360 EDTHYSQTVS NILQNQSNRW PASPTSVGYI ACSTQSAFSR WSTRANHHFL PAVDGSNQWL 420 LKYILFTVPY LHAKNPGETS PQTAPDPKLR GKGTPQDELS ANHVLAERRR REKLNERFII 480 LRSLVPFVTK MDKASILGDT IEYVKQLRRK IQELEARNHR TEAEQRSKVL EVTVQRTNSG 540 SSKEQQRSGV TTMEKRKVRI VEGVAAKAKA KAVEVVAAAT SVQVSIIESD ALLELECPHR 600 EGLLLDVMQM LREVRIEIIG VQSSLNNGVF AAELRAKVND HANGKKVSIV EVKRALNQII 660 PHAVD

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MAAPLGCRLQ SMLQAAVQSV HWTYSLFWQL CPQQVILVWG DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGETNPPTRR PCAALSPEDL TESEWFYLMC VSFSFPPGVG  120
LPGKAYARRQ HVWLTGANEA DSKTFSRAIL AKTVVCIPLL DGVVEFGTTD KVQEDLNFIQ  180
HVKSFFIDQL NTLPPKPALS EHSTSNPTSS SDHIPAVMYT VADPPAANPS QNDDMDEEEE  240
EEEEEEEEEE EEEEEEEEEE EEESGSDEET GGRIGRRGST PNMAAEASEL MQLEMPEEIR  300
VGSPNDGSNN LDSDFHLLAV SQGGNAAGQA ESTRRWGTSQ DALQVQLPAS ALHPLEDLTQ  360
EDTHYSQTVS NILQNQSNRW PASPTSVGYI ACSTQSAFSR WSTRANHHFL PAVDGSNQWL  420
LKYILFTVPY LHAKNPGETS PQTAPDPKLR GKGTPQDELS ANHVLAERRR REKLNERFII  480
LRSLVPFVTK MDKASILGDT IEYVKQLRRK IQELEARNHR TEAEQRSKVL EVTVQRTNSG  540
SSKEQQRSGV TTMEKRKVRI VEGVAAKAKA KAVEVVAAAT SVQVSIIESD ALLELECPHR  600
EGLLLDVMQM LREVRIEIIG VQSSLNNGVF AAELRAKVND HANGKKVSIV EVKRALNQII  660
PHAVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	467	472	ERRRRE
2	468	473	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	9e-98	bHLH family protein