PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX70719.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family C3H
Protein Properties Length: 372aa    MW: 41156.2 Da    PI: 7.1257
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX70719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH32.12e-10325427
                ---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  4 elCrffartGtCkyGdrCkFaHgp 27
                 +Cr+f+r G C+yG+rC++ H++
  RDX70719.1  3 DICRNFQR-GSCQYGERCRYLHVQ 25
                69******.*************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MRDICRNFQR GSCQYGERCR YLHVQQQRKS NVHGFGGQNS SQQQQNTNPF GFGSHSGSQQ  60
QQKTNPFGFG MKNSPQSNGG FHSEFKPNQF KPFENKWSRE SSNPQNGVSR QSDNNNSQQV  120
NHKCTDPEVC KRQIAEDFEQ EKPLWVLTCY SHCKGAPCDI VGDISYEELR ASAYEDAKRG  180
MSLQSIVEKE RNILKSKLVE FEKLLSEPYK MPINSSLDSQ KHQSIGANTN PFSTTQNNGP  240
LSVSSFSQLG TSLNMGFERP SAPLTNTLAQ PSYFGSGGNS LASNALNLNS SGVFSAQSSS  300
NSTPVELTMF PGSTQQTSNA FNNSGPTTMF QTTPDVQLIK SQENVSGDVS IWLKEKWNPG  360
EIPEEAPPDA FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.25e-71C3H family protein