PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX70338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NF-YB | ||||||||
Protein Properties | Length: 114aa MW: 12772.4 Da PI: 4.944 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 151.3 | 1.8e-47 | 19 | 103 | 2 | 86 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86 reqdr+lPianv+rimk++lP nak+sk++ket+qecvsefisfvtseas+kc++e+rkt+ngdd++wal++lGf+dy+epl+ + RDX70338.1 19 REQDRLLPIANVGRIMKQILPPNAKVSKESKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDVCWALGSLGFDDYAEPLRRF 103 89*******************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MVDNVGAGSS SNAENSGIRE QDRLLPIANV GRIMKQILPP NAKVSKESKE TMQECVSEFI 60 SFVTSEASEK CRKERRKTVN GDDVCWALGS LGFDDYAEPL RRFEIYINPD LNRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 1e-50 | NF-YB family protein |