PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX69828.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 200aa MW: 22527.3 Da PI: 10.0348 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 6e-20 | 22 | 71 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp k++r++lg+f+taeeAa+a++ a+++++g RDX69828.1 22 HFRGVRKRP-WGRYAAEIRDPA---KKTRVWLGTFDTAEEAARAYDTAARNFRG 71 69*******.**********83...36************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MVAKEKNVTI KTKKPHNADE VHFRGVRKRP WGRYAAEIRD PAKKTRVWLG TFDTAEEAAR 60 AYDTAARNFR GPKAKTNFPV PHPTNNNNNN VIDSPSQSST VESSTPERDP TRRPDNLMDR 120 FPFLSLQPQL LVTPVAPLRP VFFLDRSEFL AQRYPVRFEP GPVEFTSGGT QSDSDSSSVV 180 DCRPKRELNL DLNLAPPLDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 5e-27 | ERF family protein |