PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX69214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 338aa MW: 36180.4 Da PI: 6.6684 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.4e-18 | 21 | 71 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d ++ r +lg+f+tae+Aa+a++ a+++l+g+ RDX69214.1 21 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDSAARALRGA 71 689******.7*********....4456*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MGAVSDGSRS RKKTSSRGHH RFVGVRQRPS GRWVAEIKDS LQKVRLWLGT FDTAEDAARA 60 YDSAARALRG ANARTNFELP ESATCGGASK RVGGDGGSNF VPNCTEPFSF EDVNEPGADA 120 EGLLGALKAK LLDGKKGKFH FPFLAHCAAP VVQSSMVSRP TTHGKKELLL PSSANNTLLS 180 NTCDKSVVVP NHDHEGAVVS SGRVNSHSQL CQTPPVASMA WPNEVAYELS WPTHVSQVPD 240 NSLLASASAA ATMTWPLSGA IDHSTVDMTC TDEGASSNSN KSGQMMNMVS MQLPIVGGAT 300 EGLWTLQEQQ QFLQCDNNTW FSFNGSWDPL LYVPSELA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 5e-18 | ERF family protein |