PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX69022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | YABBY | ||||||||
Protein Properties | Length: 149aa MW: 16320.7 Da PI: 7.8482 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 98.7 | 1.3e-30 | 11 | 128 | 2 | 119 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 d+ seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhCt+ll vn++ +++ hl++s+ + ++ l+ + +++++ s+s++ ++ RDX69022.1 11 DHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLMPSPSQFHLGHSFFSPSHNLLEEIPNPSPNFLMNQTNLSASNEFSM 109 57789************************************************************9998666666655555555555555555555555 PP YABBY 101 lsenedeevprvppvirPP 119 + +e+pr+p ++r P RDX69022.1 110 PARTAADELPRPPIINRRP 128 5788899999999899877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MSSSSTTLSL DHLPPSEQLC YVHCNICDTV LAVSVPCTSL FKTVTVRCGH CTNLLPVNMR 60 GLLMPSPSQF HLGHSFFSPS HNLLEEIPNP SPNFLMNQTN LSASNEFSMP ARTAADELPR 120 PPIINRRPVP LVEGKGSFKA SSRQYLNPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00180.1 | 2e-28 | YABBY family protein |