PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68902.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 476aa MW: 53323.9 Da PI: 10.5695

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.9e-07	7	40	2	36
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRt 36 grW +E++ll av ++G+++W+ +a+++ Rt RDX68902.1 7 GRWGSWEELLLGGAVLRHGTRDWNVVAAELR-ART 40 8*****************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MATKVMGRWG SWEELLLGGA VLRHGTRDWN VVAAELRART VCPYTITPEV CKAKYDDLQK 60 RYSGSKAWFE ELRKTRVAEL KRALELSEDS IGSLESKLES LKAGKNEKRD DCHVDKGLGR 120 PKVHVVSQKL ERVESSTKET SKDGLSAGSF THETRTNWSP ECPVPAGSAE ENMETKPEVS 180 HSTEQVNVLS VDKLAHTIYE GQGGSCKKRR GKRKRKDCGR NMKDASVGES DLLDSADVVS 240 WCKESSTSNC GEVAKSCDVD DQIRNLKKER VEDMMEILDS IFETKGASAF RRRLDSQKRG 300 RYKKMIRQHM DFDTIRSRIS SQTIKSRVEL FRDLLLLTNN ALVFYSKSTR EYKSALLLRD 360 IVTKKMRESL KGTSNNKGTT TEATTNVPIK LPAHNPHVKP RSVRPGNRKI VAKAVGGNNS 420 ETKKPCKVDS PSSVESLTVK KKGFGRPKKL ARGAAGQRPA TPMKGKKRVR TRTKRN

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MATKVMGRWG SWEELLLGGA VLRHGTRDWN VVAAELRART VCPYTITPEV CKAKYDDLQK  60
RYSGSKAWFE ELRKTRVAEL KRALELSEDS IGSLESKLES LKAGKNEKRD DCHVDKGLGR  120
PKVHVVSQKL ERVESSTKET SKDGLSAGSF THETRTNWSP ECPVPAGSAE ENMETKPEVS  180
HSTEQVNVLS VDKLAHTIYE GQGGSCKKRR GKRKRKDCGR NMKDASVGES DLLDSADVVS  240
WCKESSTSNC GEVAKSCDVD DQIRNLKKER VEDMMEILDS IFETKGASAF RRRLDSQKRG  300
RYKKMIRQHM DFDTIRSRIS SQTIKSRVEL FRDLLLLTNN ALVFYSKSTR EYKSALLLRD  360
IVTKKMRESL KGTSNNKGTT TEATTNVPIK LPAHNPHVKP RSVRPGNRKI VAKAVGGNNS  420
ETKKPCKVDS PSSVESLTVK KKGFGRPKKL ARGAAGQRPA TPMKGKKRVR TRTKRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	212	KKRRGK
2	209	217	RRGKRKRKD
3	470	475	RTRTKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	1e-37	MYB_related family protein