PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX68570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | GRF | ||||||||
Protein Properties | Length: 416aa MW: 47268.1 Da PI: 8.3628 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.6 | 1.2e-24 | 73 | 116 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e RDX68570.1 73 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 116 79***************************************987 PP | |||||||
2 | QLQ | 56.6 | 7.9e-20 | 8 | 42 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L++Q+l+yKy+a++ +Pp+Ll+ i+ RDX68570.1 8 PFTPSQWQELEHQALIYKYMASGISIPPDLLFTIK 42 8******************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence |
MNGRNRFPFT PSQWQELEHQ ALIYKYMASG ISIPPDLLFT IKRNHFDSSR LLPHHPQHFG 60 WNYLPMGLGR KIDPEPGRCR RTDGKKWRCS KEAYPDSKYC ERHMHRGKNR SRKPVEVLKT 120 TPTTVVTTNT DASAPTILSI TKNTPALSPT THDTYHHHHH HPQHSFLYHQ SRPSNAVALS 180 FQDNSAPLFL DTHNNNTDCR NGYVYGLKEE VDEHAFFTEP SGTMRSFSTS SMEDSWQLTP 240 LTISSSSSSK ERNENNEYSY LQLQSLGSNK GCYGDIKCET LRKQLGKEEP QKTIHRFFDE 300 WPPKSRGSWL DLDDKSSTTQ LSISIPTSSH DFTTFSSTSQ RGSSVGGELW LILAFNSGVL 360 VLEPKANNVV GFTLCFVRPP FNCSPFFPSV VQVHLCFHPG IQCVLFAFIF CFSGLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-50 | GRF family protein |