PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68570.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GRF

Protein Properties

Length: 416aa MW: 47268.1 Da PI: 8.3628

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.6	1.2e-24	73	116	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e RDX68570.1 73 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 116 79***************************************987 PP
2	QLQ	56.6	7.9e-20	8	42	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L++Q+l+yKy+a++ +Pp+Ll+ i+ RDX68570.1 8 PFTPSQWQELEHQALIYKYMASGISIPPDLLFTIK 42 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MNGRNRFPFT PSQWQELEHQ ALIYKYMASG ISIPPDLLFT IKRNHFDSSR LLPHHPQHFG 60 WNYLPMGLGR KIDPEPGRCR RTDGKKWRCS KEAYPDSKYC ERHMHRGKNR SRKPVEVLKT 120 TPTTVVTTNT DASAPTILSI TKNTPALSPT THDTYHHHHH HPQHSFLYHQ SRPSNAVALS 180 FQDNSAPLFL DTHNNNTDCR NGYVYGLKEE VDEHAFFTEP SGTMRSFSTS SMEDSWQLTP 240 LTISSSSSSK ERNENNEYSY LQLQSLGSNK GCYGDIKCET LRKQLGKEEP QKTIHRFFDE 300 WPPKSRGSWL DLDDKSSTTQ LSISIPTSSH DFTTFSSTSQ RGSSVGGELW LILAFNSGVL 360 VLEPKANNVV GFTLCFVRPP FNCSPFFPSV VQVHLCFHPG IQCVLFAFIF CFSGLS

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MNGRNRFPFT PSQWQELEHQ ALIYKYMASG ISIPPDLLFT IKRNHFDSSR LLPHHPQHFG  60
WNYLPMGLGR KIDPEPGRCR RTDGKKWRCS KEAYPDSKYC ERHMHRGKNR SRKPVEVLKT  120
TPTTVVTTNT DASAPTILSI TKNTPALSPT THDTYHHHHH HPQHSFLYHQ SRPSNAVALS  180
FQDNSAPLFL DTHNNNTDCR NGYVYGLKEE VDEHAFFTEP SGTMRSFSTS SMEDSWQLTP  240
LTISSSSSSK ERNENNEYSY LQLQSLGSNK GCYGDIKCET LRKQLGKEEP QKTIHRFFDE  300
WPPKSRGSWL DLDDKSSTTQ LSISIPTSSH DFTTFSSTSQ RGSSVGGELW LILAFNSGVL  360
VLEPKANNVV GFTLCFVRPP FNCSPFFPSV VQVHLCFHPG IQCVLFAFIF CFSGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-50	GRF family protein