PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68317.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 617aa MW: 68593.1 Da PI: 8.0709

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.1	4.5e-36	190	338	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaesssssas..nsssg 88 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+ ++sk++eWL+++a+ ai el+++ + +++++ s++ + + RDX68317.1 190 SGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGYEQPSKAVEWLIKAAQDAISELPSLnnpfpdtpkqP--------SDEKRPSGQrgF---D 277 689***********************************************************66554443210........111222222121...1 PP TCP 89 ...........kaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134 + +++a+s+ s++s+ s l+l++ r+kar+rarer ++++ +++ RDX68317.1 278 dadgdtnyqhnLSLSKSACSSTSETSKGSGLSLSRseirVNREKARERARERAAKEKEKDK 338 233444555554444455555666666666666654233677*******6655555443 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MSKLGEKARA KMEEMQVYIK RESVQCLPFP DKPEREKKKE LFTDLRGVGT NDSVSDSRHQ 60 HSTGFYFFSL SMLETLTPFA KPDPTMFKRK ALTRSSDSDR DLSDKRRSPS GVYRLEERCG 120 CDMEEDEIQA EGCNKFPRVG NGRSEQYQEE EEDGGEIRRR GGGGGSDGST NHFQSSWHHS 180 SRIIRVSRAS GGKDRHSKVM TSKGLRDRRV RLSVSTAIQF YDLQDRLGYE QPSKAVEWLI 240 KAAQDAISEL PSLNNPFPDT PKQPSDEKRP SGQRGFDDAD GDTNYQHNLS LSKSACSSTS 300 ETSKGSGLSL SRSEIRVNRE KARERARERA AKEKEKDKDK EKEKEKEKEN ESSIAHHNHN 360 HNHNHMSHTA SFTELLTGGI GSTVTVPTTT SPNGSSVHQI HDDGSLFNKG TTGSRQHWSS 420 TVTPMDYFTS GLLVGPSSSS AARTQQHQSS SGHFQLGQHQ HHHHHHHHHA LPISPFSGEN 480 HSDQMQHFSF MPDHHINMPP VVTSGSSSQP TGGDYNLNFS ISSGLAGYNR GTLQSNSPSF 540 LPHLQRFQPI DGSSNLPFFI GAPAPASASA SAAPPMENNN NNNHHQLQFS PVFDARLQLC 600 YGDGTRHHSD HKGKGKN

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MSKLGEKARA KMEEMQVYIK RESVQCLPFP DKPEREKKKE LFTDLRGVGT NDSVSDSRHQ  60
HSTGFYFFSL SMLETLTPFA KPDPTMFKRK ALTRSSDSDR DLSDKRRSPS GVYRLEERCG  120
CDMEEDEIQA EGCNKFPRVG NGRSEQYQEE EEDGGEIRRR GGGGGSDGST NHFQSSWHHS  180
SRIIRVSRAS GGKDRHSKVM TSKGLRDRRV RLSVSTAIQF YDLQDRLGYE QPSKAVEWLI  240
KAAQDAISEL PSLNNPFPDT PKQPSDEKRP SGQRGFDDAD GDTNYQHNLS LSKSACSSTS  300
ETSKGSGLSL SRSEIRVNRE KARERARERA AKEKEKDKDK EKEKEKEKEN ESSIAHHNHN  360
HNHNHMSHTA SFTELLTGGI GSTVTVPTTT SPNGSSVHQI HDDGSLFNKG TTGSRQHWSS  420
TVTPMDYFTS GLLVGPSSSS AARTQQHQSS SGHFQLGQHQ HHHHHHHHHA LPISPFSGEN  480
HSDQMQHFSF MPDHHINMPP VVTSGSSSQP TGGDYNLNFS ISSGLAGYNR GTLQSNSPSF  540
LPHLQRFQPI DGSSNLPFFI GAPAPASASA SAAPPMENNN NNNHHQLQFS PVFDARLQLC  600
YGDGTRHHSD HKGKGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-42	TCP family protein