PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX68178.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 484aa MW: 54547.3 Da PI: 8.0471

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX68178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55	2e-17	229	278	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g RDX68178.1 229 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 278 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
METQQRGGET VLNLLRVLFL SLSFSWFEFH CTLISLHKEV HETLPKGDEL KARSCLEERD 60 FFFQDMAMFD LNVDINHAEA DADSSCAQKG VQVQLQSFPP EISDSRTSNS SVWNPAEEDS 120 SNNYSPFIFG ILKKERGGSG SEFYASTERD NNKEQNMTQE AEIVTRTLFP VTVADRGGRV 180 PDFKLGLWGN TQWLNLSFPE TDGQNGQKTL QQKLPHVKKN RRGPRSRSSQ YRGVTFYRRT 240 GRWESHIWDC GKQVYLGGFD TAQAAARAYD RAAIKFRGVD ADINFSLSDY EEDLKQMRGL 300 SKEEFVLLLR RQINGISRRS STYKGVLALH KDGQGEPRMG PFLDKTFYPK SSIKCDDGKV 360 EANFKPCFYK EEIIANSSMA GTCYNLDLSL GIFPSSKKLK NNDYGGGFSF GCMACKIPEE 420 RGIMEKAMVD RIRNVPLQTF SNMAWQICSN GSIASRPLQS NAASSGFVSS SSCLIKHTSN 480 QHTY

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

METQQRGGET VLNLLRVLFL SLSFSWFEFH CTLISLHKEV HETLPKGDEL KARSCLEERD  60
FFFQDMAMFD LNVDINHAEA DADSSCAQKG VQVQLQSFPP EISDSRTSNS SVWNPAEEDS  120
SNNYSPFIFG ILKKERGGSG SEFYASTERD NNKEQNMTQE AEIVTRTLFP VTVADRGGRV  180
PDFKLGLWGN TQWLNLSFPE TDGQNGQKTL QQKLPHVKKN RRGPRSRSSQ YRGVTFYRRT  240
GRWESHIWDC GKQVYLGGFD TAQAAARAYD RAAIKFRGVD ADINFSLSDY EEDLKQMRGL  300
SKEEFVLLLR RQINGISRRS STYKGVLALH KDGQGEPRMG PFLDKTFYPK SSIKCDDGKV  360
EANFKPCFYK EEIIANSSMA GTCYNLDLSL GIFPSSKKLK NNDYGGGFSF GCMACKIPEE  420
RGIMEKAMVD RIRNVPLQTF SNMAWQICSN GSIASRPLQS NAASSGFVSS SSCLIKHTSN  480
QHTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.2	1e-60	AP2 family protein