PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX67745.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 183aa MW: 21063 Da PI: 7.371 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.2e-20 | 74 | 125 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrd +g +r++lg+f taeeAa+a+++a+ +++g RDX67745.1 74 KKYRGVRRRP-WGKFAAEIRDS-ARG-GARVWLGTFNTAEEAARAYDRAAFEMRG 125 59********.**********2.233.4*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence |
MKQILAFLTE LCEHDAVWDT YDIILGSSDN PRLISASQDY THCVLKYKRP RFLYKCDTME 60 DLKERVKEGE PKQKKYRGVR RRPWGKFAAE IRDSARGGAR VWLGTFNTAE EAARAYDRAA 120 FEMRGTVAIL NFPDEHLPCN VPSLTKSSSS KTQLGKQVLE FECLDDKLLE ELLNCDEKSI 180 HQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23220.1 | 5e-25 | ERF family protein |