PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67740.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 371aa MW: 43485.2 Da PI: 6.835

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00054	135	158	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C+ Cg+ ++++ +Lk+H + H RDX67740.1 135 YTCGVCGRKCKTHLDLKKHFKQlH 158 9******************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MNSLFLHNVN TSIIHFPLPL SPPKLLRRRH ERYPRFQCCV DIDMVKNRQG IYTPKNDKVV 60 VLWDLDNKPP RGPPYDAAVS LKTLAARFGD LVDFSAYANR HAFIHLPQWV LTQRRDRRDL 120 DILERKNLVT PPEPYTCGVC GRKCKTHLDL KKHFKQLHLR ERQKKLNRLK SLKGKKRHRF 180 KERFLRGNHK YNEAARTLLV PKVGYGLAAE LRRAGVFVKT VQDKPQAADW ALKRQMVHSM 240 SRGIDWLFLV SDDSDFSEML RRAREADLGT VVVGDWDRAL GRHADFWVPW TGVENGDVDL 300 LPKRRDKRTM DEVLEDHHDA LSLNEDENED LRQDFLLLYS EDDDDDHHVE DYYDDDDDDE 360 EEEEDGPSEV C

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MNSLFLHNVN TSIIHFPLPL SPPKLLRRRH ERYPRFQCCV DIDMVKNRQG IYTPKNDKVV  60
VLWDLDNKPP RGPPYDAAVS LKTLAARFGD LVDFSAYANR HAFIHLPQWV LTQRRDRRDL  120
DILERKNLVT PPEPYTCGVC GRKCKTHLDL KKHFKQLHLR ERQKKLNRLK SLKGKKRHRF  180
KERFLRGNHK YNEAARTLLV PKVGYGLAAE LRRAGVFVKT VQDKPQAADW ALKRQMVHSM  240
SRGIDWLFLV SDDSDFSEML RRAREADLGT VVVGDWDRAL GRHADFWVPW TGVENGDVDL  300
LPKRRDKRTM DEVLEDHHDA LSLNEDENED LRQDFLLLYS EDDDDDHHVE DYYDDDDDDE  360
EEEEDGPSEV C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	155	RRDRRDLDILERKNLVTPPEPYTCGVCGRKCKTHLDLKKHFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-147	C2H2 family protein