PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX67535.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 129aa MW: 14624.9 Da PI: 11.4606 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.7 | 1.8e-29 | 65 | 115 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ +qvtfskRr+g+lKKA+E+SvLCda++a+i+fs++gkl+eyss RDX67535.1 65 KRIENKTSQQVTFSKRRTGLLKKAHEISVLCDAQIALIMFSTKGKLFEYSS 115 79***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MGPTAWYGLS PKAEPRQNDT STFSHSNSIL ARQRIVPQPL SPITSRQRIN YQLSTKMGRG 60 RVQLKRIENK TSQQVTFSKR RTGLLKKAHE ISVLCDAQIA LIMFSTKGKL FEYSSERSLF 120 MVGHLSLKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 2e-32 | MIKC_MADS family protein |