PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67532.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 447aa MW: 51866.8 Da PI: 7.2063

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	176	222	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd llv++v+q+G + W+ Ia+ ++ gR +kqc++rw+++l RDX67532.1 176 KGQWTIEEDGLLVQLVEQYGLRKWSHIAKILP-GRIGKQCRERWHNHL 222 799***************************.***********97 PP
2	Myb_DNA-binding	60.1	4.6e-19	228	270	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ WT eEd++l++a++q G++ W+ Ia++++ gRt++++k++w+ RDX67532.1 228 KDTWTDEEDKILIEAHAQIGNK-WAEIAKRLP-GRTENSIKNHWN 270 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MDLETMLKET YVSQPQESFL QPSMKHMLPF GNPSFLQDFN HIDQFHVNVS SPNPIQTPNF 60 DAFDNFTFAN SSPGFDVYEC KPFVENVHAH VMDNFLYGNY SFNHPQRNQL DMMVANQSLL 120 PFNPQETKSP NFVVPDEVSC ISSVNYYKRV GANKNNKSYP TTRRTYKVRK KSNIVKGQWT 180 IEEDGLLVQL VEQYGLRKWS HIAKILPGRI GKQCRERWHN HLRPDIKKDT WTDEEDKILI 240 EAHAQIGNKW AEIAKRLPGR TENSIKNHWN ATKRRQYSKR KCRSKYPRGI LLQEYIKSLN 300 LDKNPPIDYR RKSSANYANA MKNKTSTSKV TVPALPQTAH KFCANDCFAP NYIDNFNVVP 360 DFFFGENLFE GGCSIDSLLD DVHCATPMDK KDFEGKMQCD HVETEMPLEM LEVEVKKELD 420 LVEMMSQINN EIVHKIQRDE EEVELGP

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MDLETMLKET YVSQPQESFL QPSMKHMLPF GNPSFLQDFN HIDQFHVNVS SPNPIQTPNF  60
DAFDNFTFAN SSPGFDVYEC KPFVENVHAH VMDNFLYGNY SFNHPQRNQL DMMVANQSLL  120
PFNPQETKSP NFVVPDEVSC ISSVNYYKRV GANKNNKSYP TTRRTYKVRK KSNIVKGQWT  180
IEEDGLLVQL VEQYGLRKWS HIAKILPGRI GKQCRERWHN HLRPDIKKDT WTDEEDKILI  240
EAHAQIGNKW AEIAKRLPGR TENSIKNHWN ATKRRQYSKR KCRSKYPRGI LLQEYIKSLN  300
LDKNPPIDYR RKSSANYANA MKNKTSTSKV TVPALPQTAH KFCANDCFAP NYIDNFNVVP  360
DFFFGENLFE GGCSIDSLLD DVHCATPMDK KDFEGKMQCD HVETEMPLEM LEVEVKKELD  420
LVEMMSQINN EIVHKIQRDE EEVELGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	4e-97	MYB family protein