PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67265.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 300aa MW: 33800.5 Da PI: 8.4107

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.9	9e-12	39	95	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ ++ Aa+a++ a++k++g RDX67265.1 39 SIYRGVTRHRWTGRYEAHLWDkTCWNEsQSKKGRQGAYDHEDAAARAYDLAALKYWG 95 57*****************99999988888888*99***********98 PP
2	AP2	56.7	5.8e-18	138	189	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++gt+eeAa a++ a+ +++g RDX67265.1 138 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYGTEEEAAMAYDMAAIEYRG 189 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MAKTTTSQKS LNSGGSISKV KRARKSIPRD RDTPSQRSSI YRGVTRHRWT GRYEAHLWDK 60 TCWNESQSKK GRQGAYDHED AAARAYDLAA LKYWGQDTVL NFPLSNYQDH LKEMEDQSKE 120 EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRVF GNKYLYLGTY GTEEEAAMAY 180 DMAAIEYRGL NAVTNFDLSR YVKWLRPKEQ ETPGKPEPEV EAQHLSPTTT TTPSGNATAA 240 SSVVDCPPPP PPPPPPRTFP EDIQTFFESQ DSGIYADTDD IIFGDLTSIA SPIFHCELNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-103	AP2 family protein