PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX67081.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 470aa MW: 51998.2 Da PI: 9.185

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX67081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	20.5	8.2e-07	424	446	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++Crff r C+ G++C++ H+ RDX67081.1 424 KPCRFFNRLKGCRNGSNCPYQHD 446 69********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MEDFAWTCLR NCFILKLVST TYKVKFFSSE DCPSKVGQQS KDHHRPKTLS TWPSTIKWKC 60 PPMIALSDGW RVTTGEESKE KHDQELREKR ELEAFYPRIS SIPLGPYVSS AVEKECYDDS 120 LTPLVPLSPI EEQDDSVENI KVDAAVTKHA ESSTKELQSN LQQNIPPATS LVNSQCSEKP 180 EAVPATSFLE ADLVGASVAV ASAIMKSNEQ GNKIDVDLLL QIFSDPIMVA KIIEKYRNSS 240 TIMSTPTFYS KPSTSSIPLS STTPNTTVSL LPASEPSVAT PSVSLLTSTT DNPATPPVSA 300 QPAKTHFVTS PTPPSPPHMH RSVNKNISHM PNRVVPSLNT NPPKQEVKPD APLASVFSTI 360 MHGVEKQVGS TTAGAVKDVN FYKNLVRNHG THRQDMQSHS NLQDLKRPRN NIIKPVEVKF 420 QIQKPCRFFN RLKGCRNGSN CPYQHDMSGT VLTTHKAKRL KVVPKTTWKM

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MEDFAWTCLR NCFILKLVST TYKVKFFSSE DCPSKVGQQS KDHHRPKTLS TWPSTIKWKC  60
PPMIALSDGW RVTTGEESKE KHDQELREKR ELEAFYPRIS SIPLGPYVSS AVEKECYDDS  120
LTPLVPLSPI EEQDDSVENI KVDAAVTKHA ESSTKELQSN LQQNIPPATS LVNSQCSEKP  180
EAVPATSFLE ADLVGASVAV ASAIMKSNEQ GNKIDVDLLL QIFSDPIMVA KIIEKYRNSS  240
TIMSTPTFYS KPSTSSIPLS STTPNTTVSL LPASEPSVAT PSVSLLTSTT DNPATPPVSA  300
QPAKTHFVTS PTPPSPPHMH RSVNKNISHM PNRVVPSLNT NPPKQEVKPD APLASVFSTI  360
MHGVEKQVGS TTAGAVKDVN FYKNLVRNHG THRQDMQSHS NLQDLKRPRN NIIKPVEVKF  420
QIQKPCRFFN RLKGCRNGSN CPYQHDMSGT VLTTHKAKRL KVVPKTTWKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	7e-07	HB-other family protein