PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX66555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | Dof | ||||||||
Protein Properties | Length: 178aa MW: 19977.6 Da PI: 9.801 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.7 | 1.5e-39 | 39 | 97 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +ek+++cprC+s++tkfCy+nny+++qPr+fCkaC+ryWt+GGalrnvPvG+grrk k RDX66555.1 39 PEKIIACPRCKSMETKFCYFNNYNVNQPRHFCKACQRYWTAGGALRNVPVGAGRRKAKL 97 68999***************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MAQVQSGQGS EGIKLFGTTI TLCGRERKED KKGTEEKRPE KIIACPRCKS METKFCYFNN 60 YNVNQPRHFC KACQRYWTAG GALRNVPVGA GRRKAKLSGH DTTAFFDGGL QHFSFDECHA 120 ATVAHGDFRQ LFSSKRRRTS SGGQQLLVTA AQHESQKKLV IINEITEHPN QIQTKEEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34140.1 | 5e-52 | Dof family protein |