PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX66500.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 346aa MW: 38673 Da PI: 8.2101

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX66500.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.5	4.1e-20	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +v+++G g+W++++++ g+ R++k+c++rw +yl RDX66500.1 14 KGPWTPEEDKKLVAYVEKHGHGNWRLVPAKAGLQRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.6	2.2e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T eEd +++++++lG++ W+ Ia +++ +Rt++++k++w++ RDX66500.1 67 RGNFTLEEDHTILQLHALLGNK-WSIIATHLP-KRTDNDIKNYWNTN 111 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRMPCCEKV GLKKGPWTPE EDKKLVAYVE KHGHGNWRLV PAKAGLQRCG KSCRLRWINY 60 LNPYIKRGNF TLEEDHTILQ LHALLGNKWS IIATHLPKRT DNDIKNYWNT NLKKRLIRMG 120 LDPITHEPIK SNTYEAYAGD NDQFMNTINM SHVAQWESAR LEAETRGSML QFGSRPSHLP 180 RLILSKIPTQ PSPSPHSLST KSSTVYNMYA LVLATNNELQ SPISTSSIPS KKLPAVSTSV 240 GQFTNPENSI SYKNDGNGIE SSSESQKIIE GYASNFQDDD DIMVAVEAFR TARCETIQEL 300 LNGSTAMEGL INNSFERDAK KSMEMESAIS VLSLLVLIKG SDLDAV

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRMPCCEKV GLKKGPWTPE EDKKLVAYVE KHGHGNWRLV PAKAGLQRCG KSCRLRWINY  60
LNPYIKRGNF TLEEDHTILQ LHALLGNKWS IIATHLPKRT DNDIKNYWNT NLKKRLIRMG  120
LDPITHEPIK SNTYEAYAGD NDQFMNTINM SHVAQWESAR LEAETRGSML QFGSRPSHLP  180
RLILSKIPTQ PSPSPHSLST KSSTVYNMYA LVLATNNELQ SPISTSSIPS KKLPAVSTSV  240
GQFTNPENSI SYKNDGNGIE SSSESQKIIE GYASNFQDDD DIMVAVEAFR TARCETIQEL  300
LNGSTAMEGL INNSFERDAK KSMEMESAIS VLSLLVLIKG SDLDAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	2e-84	MYB family protein