PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX65738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | TCP | ||||||||
Protein Properties | Length: 319aa MW: 34350.5 Da PI: 6.9642 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 115.1 | 9.1e-36 | 73 | 176 | 2 | 105 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssgkaaksaa 95 a+++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a ++ + +sssg++ ++a RDX65738.1 73 APRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVsvggtL-----KIPTTSSSGNQVEEAW 166 899*************************************************************88888444222210.....1111122222222222 PP TCP 96 kskksqksaa 105 ++k+++ s++ RDX65738.1 167 NKKRKRPSNS 176 3333333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MASDQVEHEM DQDDEGGTTD LSTSDAEKDP TQTTNLNGVS KHRHTKGFQV FPMKEEPTDS 60 DPDPVAMPVP VKAPRRSSTK DRHTKVEGRG RRIRIPATCA ARIFQLTREL GHKSDGETVR 120 WLLEHAEQAI IEATGTGTVP AIAVSVGGTL KIPTTSSSGN QVEEAWNKKR KRPSNSEFVD 180 LNDAVTQSSG LAPVQVAQNL VPVWAVGNPS MVVPANTLWM IPQAATTTNQ QPQIWALSPS 240 LFNVAPRPIT PLMMAACTNT SNSAVITSTV GAKVATNSSM APSVSSSGTK TGSSHTLRDF 300 SLEIYDKQEL QFLGSHTNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 1e-64 | TCP family protein |