PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX65678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | LBD | ||||||||
Protein Properties | Length: 211aa MW: 23873.6 Da PI: 7.8941 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 140.5 | 5.7e-44 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+ +C++apyfp +qp+kfanvh++FGasnv+kll++l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq+ql+ql+ +l +k+ RDX65678.1 7 PCAACKFLRRKCQLECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKS 105 7********************************************************************************************998887 PP DUF260 100 e 100 e RDX65678.1 106 E 106 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MASPNSPCAA CKFLRRKCQL ECAFAPYFPP DQPQKFANVH RIFGASNVTK LLNDLHPHQR 60 EDAVNSLAYE AEMRLRDPVY GCVGVISLLQ HQLRQLQMDL YCAKSELSRY QNLSITTTNH 120 GFIASECATT TYHHYQNTSS GSLSRDHHYH YHHHHQFFPR EQQMVRGFDS GNNYDASLLA 180 MNISASLGQL NQLQHQSAAG GGDDRHATNR S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 3e-75 | LBD family protein |