PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX65629.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 356aa MW: 39812.2 Da PI: 7.7304

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX65629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.6	9.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl RDX65629.1 14 KGPWSPEEDAKLKSYIEKNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.2	3.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ RDX65629.1 69 GGFSEEEDNIICSLYVSIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNLRHGG FSEEEDNIIC SLYVSIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 HRREPRNRGN YNSVKQESDV NRGSSDGDSS SLSLVHENNS TTQQQPCWPQ NINMPVLPLQ 180 VPLYTNQGPS FNDQDSIKKL LIKLGGRFSG DYYHPALDGM NLQFSDGQQV YQEQVHVGSS 240 SSACIANNEV QFAQTGQYSA VDNLMQGQGS NFTPSFEEMV PSSNYEDGLE FLYGEGMINH 300 KIIDSTTTCG QRTTSTNWGE TNTPIYHHHS LASNYQGQGV GQECALQEFS YPRVAQ

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNLRHGG FSEEEDNIIC SLYVSIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
HRREPRNRGN YNSVKQESDV NRGSSDGDSS SLSLVHENNS TTQQQPCWPQ NINMPVLPLQ  180
VPLYTNQGPS FNDQDSIKKL LIKLGGRFSG DYYHPALDGM NLQFSDGQQV YQEQVHVGSS  240
SSACIANNEV QFAQTGQYSA VDNLMQGQGS NFTPSFEEMV PSSNYEDGLE FLYGEGMINH  300
KIIDSTTTCG QRTTSTNWGE TNTPIYHHHS LASNYQGQGV GQECALQEFS YPRVAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-81	MYB family protein