PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX65280.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 29431.6 Da PI: 5.0217 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.9 | 5.9e-30 | 54 | 112 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YY+C+++ gC++kk+ver+++d ++++itY+++Hnh+ RDX65280.1 54 SDFWSWRKYGQKPIKGSPHPRGYYKCSTSkGCSAKKQVERCRTDASMLIITYTSTHNHP 112 699***********************9988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MDSNTSASPK LESEASSELK SSETQKKRKM VEKTVVAVRI GENVGKLKNE GLPSDFWSWR 60 KYGQKPIKGS PHPRGYYKCS TSKGCSAKKQ VERCRTDASM LIITYTSTHN HPCPAATIST 120 TNSSQQPKES ESETTLSKEE DQEHIEEQRD NNNYNNKISD EGTNEENFHY LQSPIRCSQD 180 IIIDQEDPFK LNMEKSHDKI DLLLEEEPLC YAQLKNMSAS KNEEFDFFDE LEELPMSSSF 240 LHFTRSIFSD ERIPVAPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 3e-35 | WRKY family protein |