PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX64421.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 523aa MW: 58058 Da PI: 8.1046

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX64421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.8	9.8e-12	141	198	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.....kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d+ g +r +g f+ta Aa+a+++a+ k++g RDX64421.1 141 SQYRGVTFYRRTGRWESHIWDC---GkqpllIRlVLGIVGGFDTAHAAARAYDRAAIKFRG 198 78*****************6...23467766888889*****************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MLDLNLNADS SQNDDSPVLL DKFPEASSGT SNSSVVNVEG SSNEDSCSTR AGDVFTFNFG 60 ILKVEGANDV VAAASTKELF PVSAENWQGQ SSTSSFQAKK SLMDLSLDHQ NGEVKVVQVQ 120 QQQQQQPQVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQPLLIR LVLGIVGGFD 180 TAHAAARAYD RAAIKFRGLD ADINFNLVDY EEDLKQMKNL SKEEFVHILR RHSTGFSRGS 240 SKYRGVTLHK CGRWEARMGQ FLGKKLFPCL EKHVYDACFK ETIGEVYISW AIRQRSRSCK 300 LFTVPTNICL PFDFLETRAY DKAAIKCNGR EAVTNFEPST YESEMKPEAI NEGGCHDLDL 360 NLGMATPGHG PQENRGHLQF PPVPYNTHLG RSSRMETNVN SVIGEPSLKR LVVPEERPSV 420 WNAAYSTFFS NRERAERMGI DPSEGVTNWA WQTHGQITAN PVPPFSTAAS SGFSISATFP 480 SSAIFPTKSM NSIPQSLCFT SPSAPGSNAP QFYYEVKSPQ APS

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MLDLNLNADS SQNDDSPVLL DKFPEASSGT SNSSVVNVEG SSNEDSCSTR AGDVFTFNFG  60
ILKVEGANDV VAAASTKELF PVSAENWQGQ SSTSSFQAKK SLMDLSLDHQ NGEVKVVQVQ  120
QQQQQQPQVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQPLLIR LVLGIVGGFD  180
TAHAAARAYD RAAIKFRGLD ADINFNLVDY EEDLKQMKNL SKEEFVHILR RHSTGFSRGS  240
SKYRGVTLHK CGRWEARMGQ FLGKKLFPCL EKHVYDACFK ETIGEVYISW AIRQRSRSCK  300
LFTVPTNICL PFDFLETRAY DKAAIKCNGR EAVTNFEPST YESEMKPEAI NEGGCHDLDL  360
NLGMATPGHG PQENRGHLQF PPVPYNTHLG RSSRMETNVN SVIGEPSLKR LVVPEERPSV  420
WNAAYSTFFS NRERAERMGI DPSEGVTNWA WQTHGQITAN PVPPFSTAAS SGFSISATFP  480
SSAIFPTKSM NSIPQSLCFT SPSAPGSNAP QFYYEVKSPQ APS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	4e-87	AP2 family protein