PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX64116.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | MYB_related | ||||||||
Protein Properties | Length: 106aa MW: 12242.6 Da PI: 9.5116 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.1 | 4.1e-08 | 15 | 58 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT +++ a +++ + +W Ia+ +g +t++++k ++ RDX64116.1 15 SWTRMQNKQFESALALYDQDtpdRWQNIAKVVG-DKTAEEVKRHY 58 7*****************99*************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MASNSHKNNK ENSSSWTRMQ NKQFESALAL YDQDTPDRWQ NIAKVVGDKT AEEVKRHYEI 60 LLEDLRHIES GRVPIPSYKS TQNNQERVAV EIAFSSTESR GKKSKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 5e-34 | MYB_related family protein |