PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX63985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 22997.6 Da PI: 10.1496 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.4 | 7.1e-10 | 15 | 62 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 + +Er+RR++++ f++L +++P + +s+ +s + +A++YIk+Lq RDX63985.1 15 KFIERNRRNQMKALFSKLNSVVPRQ---SSREaNSLPDQIGEATNYIKNLQ 62 569*********************8...56666*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MEQEKNPSSS KSDRKFIERN RRNQMKALFS KLNSVVPRQS SREANSLPDQ IGEATNYIKN 60 LQIKLEKMKE KRNKLIDIIE RSKNNASMTM GFKCPQFNIQ QRGSALEVVL VTGLDCQFMF 120 NETIRVLQEE GSDVVSVSYT VVENEVFHTI HCQLGESANG ALRISEKLKK CVNLFLFPKQ 180 IRGYLHAKFA ILEAARSVQK L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 7e-43 | bHLH family protein |