PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX63432.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 589aa MW: 66730.3 Da PI: 6.7551 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 89.7 | 3.2e-28 | 66 | 149 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ +r+++lk+plWeevs+k++ g++rs+k+Ckek+en+ k+ k++ke+++++ + +t+++fdql+ RDX63432.1 66 RWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKLAGLGYHRSAKKCKEKFENVYKYNKRTKENKSGK--SHGKTYKFFDQLQ 149 8*****************************************************************99996..55667******98 PP | |||||||
2 | trihelix | 98.8 | 4.7e-31 | 409 | 494 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+++e +++++ k+plWe++s++m++ g+ rs+k+Ckekwen+nk++kk++e++k+r e+s+tcpyf++l+a RDX63432.1 409 RWPKTEVHALIRLRTSLEVNYQENGPKAPLWEDISIAMQRLGYIRSAKRCKEKWENINKYFKKVRESSKER-REDSKTCPYFHELDA 494 8*********************************************************************8.78999********85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 589 aa Download sequence |
MQLGDSSVLE ISSHNEPVMA VAAAAPPEGA AHDGGEEDGG EMIRMDVDAN SGEGNEGNKM 60 SFGGNRWPRQ ETLALLKIRS DMDAVFRDSS LKGPLWEEVS RKLAGLGYHR SAKKCKEKFE 120 NVYKYNKRTK ENKSGKSHGK TYKFFDQLQA LENQFKVSYT PKSQPTTTLA TTNIDIGNKV 180 ISHVTPFPST NPTLISPSPQ TTATTISTTK PRDSSPPQTT TTANNNNVPN VPYSLPNMNT 240 PFSTTTSTSS STASDEDLEE RYKKKRKWKD YFRRLTRKVL LKQEEMQRKF LEAMDKRERE 300 RVAQQDNWRM HEMARVNREH EILVQERSTA AAKDAAVIAL LQNLYGQQNP TQIEPPQQKQ 360 TVMPQTQPPI SLPNNTFETK KTNNVHSAAT STTTTTTTSP SPVSACSSRW PKTEVHALIR 420 LRTSLEVNYQ ENGPKAPLWE DISIAMQRLG YIRSAKRCKE KWENINKYFK KVRESSKERR 480 EDSKTCPYFH ELDAIYKEKN KSQNSFGMLQ IMKPNERMMM EPLMVQPEQQ WRPPPQSLEE 540 GVGEENASED EYQEKEEEEN NGDEHDGAGE DGDSVEDEGA SRYEIATNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G76880.1 | 4e-68 | Trihelix family protein |