PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX63225.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 555aa MW: 63733.8 Da PI: 4.536

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX63225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42	2.4e-13	172	253	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+qe+ +L++a ++ + +r++l+ W++v+k + + ++er+ +qC+++++ l+k+ykk+k+ + +++yf++++ RDX63225.1 172 WTEQETFVLLDAWGDRFLQHGRKSLRCEEWQQVAKMVsQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDS----DGKWVYFKRMD 253 ***********************************555789*******************99983....346*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MDGIEDDARY PSNPYGIISH RRGYGYQNSP YSLPVDDEYA QHDNDENEEQ EQLEGDDEVD 60 VDQSDSLQLP QKGANEEDGM DGGGGENYDN HDDDDDDDDE EEEEEEEEEI KQISYYATKS 120 EDDLEWHPKK QKLKSLISTY ELAPRVPAPA AAAAAPSVPK PSFGGRNSLT DWTEQETFVL 180 LDAWGDRFLQ HGRKSLRCEE WQQVAKMVSQ VSKIERTDTQ CRNRLDTLKK KYKKEKAKFP 240 DSDGKWVYFK RMDELMSSPP QQAGFSCGLD SGEYVFMNPQ SYLNRANGLD EMRDSPENTE 300 STGEEGSDGP QAKKRRKGRG SGEASSFRLL ADSIQKFSKI YEKIENSKRQ QMVELEKMRM 360 DFHKELETQK RQILENLQCE ISKLEHRNDE NDDSAENDHS CMILFFTEVL TTLLKLITSE 420 VFSWIPLIDI HVWLFLDLTL KKFGSFPSKA LMQFKGSDYY ALRESLKKID SFIESPTFSK 480 MLNHYSIHTG TRTSTVLFQF LEQLICNLIA FCYSKGIDQA AVGGGTRWKA FFIHLLKKQQ 540 SLLNLICFAE TINEN

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MDGIEDDARY PSNPYGIISH RRGYGYQNSP YSLPVDDEYA QHDNDENEEQ EQLEGDDEVD  60
VDQSDSLQLP QKGANEEDGM DGGGGENYDN HDDDDDDDDE EEEEEEEEEI KQISYYATKS  120
EDDLEWHPKK QKLKSLISTY ELAPRVPAPA AAAAAPSVPK PSFGGRNSLT DWTEQETFVL  180
LDAWGDRFLQ HGRKSLRCEE WQQVAKMVSQ VSKIERTDTQ CRNRLDTLKK KYKKEKAKFP  240
DSDGKWVYFK RMDELMSSPP QQAGFSCGLD SGEYVFMNPQ SYLNRANGLD EMRDSPENTE  300
STGEEGSDGP QAKKRRKGRG SGEASSFRLL ADSIQKFSKI YEKIENSKRQ QMVELEKMRM  360
DFHKELETQK RQILENLQCE ISKLEHRNDE NDDSAENDHS CMILFFTEVL TTLLKLITSE  420
VFSWIPLIDI HVWLFLDLTL KKFGSFPSKA LMQFKGSDYY ALRESLKKID SFIESPTFSK  480
MLNHYSIHTG TRTSTVLFQF LEQLICNLIA FCYSKGIDQA AVGGGTRWKA FFIHLLKKQQ  540
SLLNLICFAE TINEN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	312	318	AKKRRKG
2	313	317	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-59	Trihelix family protein