PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX63072.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 314aa MW: 34866.3 Da PI: 10.2331 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 352.4 | 9.7e-108 | 31 | 314 | 1 | 300 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki.rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllalllv 87 md d+ + rn+gyyepa+s+k++lglqlmss++e+ r++ + l+++++a+++rd m++ +rd+++++ +++k+++++++ RDX63072.1 31 MDGDNGLNiRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGgRNAAV-LAGTNGAFHHRDigmpqaatypMEY-MRDAWISS-------QRDKYMNMIPT 120 888888888*************************988766355555.9************************.9******9.......889*******9 PP GAGA_bind 88 enslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader 186 +++ ++ +++t+s++++q+++ p+l ++ + e+ p++e + + ++kkrq +k+pk++kakk+k+ ++ +k++++++ +r RDX63072.1 121 NHN--------YGGIPETSSAHQIQMIQAPELPKEEKP-----VEEEAPVVE----KANGGTRKKRQGPKVPKSPKAKKPKRGPRMPKDENAPSV--QR 200 997........999************554444333333.....334445444....344566777888**************8888877666666..79 PP GAGA_bind 187 skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDL 285 ++ +kk++++v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt +SvyPLP+stkrrgaRiagrKmS gafkk+LekLaaeGy++snp+DL RDX63072.1 201 ARVPKKTTEIVINGIDMDISSIPIPVCSCTGATQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDL 299 *************************************************************************************************** PP GAGA_bind 286 kdhWAkHGtnkfvti 300 +++WAkHGtnkfvti RDX63072.1 300 RTYWAKHGTNKFVTI 314 **************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MACRLLTPRT LTVYIHYIVF LQLFSSFGVV MDGDNGLNIR NWGYYEPATS FKSHLGLQLM 60 SSMPEKPLIG GRNAAVLAGT NGAFHHRDIG MPQAATYPME YMRDAWISSQ RDKYMNMIPT 120 NHNYGGIPET SSAHQIQMIQ APELPKEEKP VEEEAPVVEK ANGGTRKKRQ GPKVPKSPKA 180 KKPKRGPRMP KDENAPSVQR ARVPKKTTEI VINGIDMDIS SIPIPVCSCT GATQQCYRWG 240 SGGWQSACCT TGMSVYPLPM STKRRGARIA GRKMSIGAFK KVLEKLAAEG YNFSNPIDLR 300 TYWAKHGTNK FVTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 3e-87 | BBR-BPC family protein |