PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62941.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 299aa MW: 34003.1 Da PI: 6.4074

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.9	3.6e-18	96	149	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k RDX62941.1 96 KKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 149 456899***********************************************9 PP
2	HD-ZIP_I/II	131.5	3.1e-42	95	185	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++++++L++e+ RDX62941.1 95 EKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKSDNDALQAQNQKLQAEI 185 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MADAKELRPN TRYLPKTCNE MAFFPANFML QTPHHDDHQP PPSLTSILPT CTPQEYHGGL 60 SFLGKRSMSF SSGIEHGEEA NAEEDLSDDG SQAGEKKRRL NMEQVKTLEK SFELGNKLEP 120 ERKMQLARAL GLQPRQIAIW FQNRRARWKT KQLEKDYDLL KRQYEAVKSD NDALQAQNQK 180 LQAEILALKS REPTESINLN KETEGSCSNR SENSSDIKLD ISRTPAIDSP LSTHQPSRPL 240 FPSSARPAGV AQLFQTSSRP DLPCQKIDQI VKEESLSNMF CGMDDQSGFW PWLEQQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	152	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-118	HD-ZIP family protein