PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX62460.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 313aa    MW: 35485.1 Da    PI: 4.477
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX62460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.51.3e-1979132356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k+++++ eq++ Le+ F  ++++  e++ +LAk+lgL+ rqV +WFqNrRa++k
  RDX62460.1  79 KKRRLSVEQVQFLEKSFDDENKLEPERKIRLAKELGLQPRQVAIWFQNRRARWK 132
                 556899***********************************************9 PP
2HD-ZIP_I/II126.11.6e-4079170293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  kkrrls eqv++LE+sF+ e+kLeperK +la+eLglqprqva+WFqnrRAR+k+k+lEkdy++L+++y+ lk++ ++L +e+++L++e+++
   RDX62460.1  79 KKRRLSVEQVQFLEKSFDDENKLEPERKIRLAKELGLQPRQVAIWFQNRRARWKSKRLEKDYDSLQASYNDLKANYDNLLREKDKLKAEVAR 170
                  9**************************************************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MAGGSVFCSA SNLTTLLPNQ TSQPPDSLFL SASSPFLGSR SIVSFGDVQG GKGCNDSFFR  60
PYDENGDEDM DEYFHQPGKK RRLSVEQVQF LEKSFDDENK LEPERKIRLA KELGLQPRQV  120
AIWFQNRRAR WKSKRLEKDY DSLQASYNDL KANYDNLLRE KDKLKAEVAR LAEKVLGREK  180
HEENVKQDET RELQEPLQKC LIDSASEGEG SKVSIGACKV EDISSAKSDI FDSESPHYTD  240
GVHSALLETG DSSYVFEPDQ SDVSQDEEDN LSKTLFPPYI FPKLEDVDYS DPPHSSCHFG  300
IPEEDQAIWS WSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.15e-45HD-ZIP family protein