PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX62261.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 497aa MW: 55328.6 Da PI: 6.9068

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX62261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.7	2e-05	116	137	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+k F++k L H+r+H RDX62261.1 116 VCCICKKEFPTKNALFGHMRSH 137 6********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MDHKEKDKRE ASDHELESCK EMKRSLLGSC KGEVVESMAD EVIAVKSASP TMRECDICGK 60 IFGSGKALGG HRRSHFQKQQ KKVKVRFTNN QSPKAGDNSN TNNRANCDYD DDGKRVCCIC 120 KKEFPTKNAL FGHMRSHPER SWRGVSPPTH SHKHSYSYSS SYSYSSSLNS DSMEKSKEDH 180 DDDDDCVGVF APDEHHHIDV IDLSKFTSPS WLKKDTRGRK CIGGYEAAET LAYLSAYKYF 240 CGDQSNNRVF PKKDEVQPKS ASALIRHEKR KIGESSSKKQ VKKIKFYMKG ELELVGNKDG 300 AAECYGDGGG GEKVNRCKGL SESGVERVSY MDDEDVGVDV DVDVGEGFDD VNTEVTTTAR 360 VQDHFAERKK VKKMDQKGKS SSKKMVLKSK GKDPECENGS KEKVGGYKCG ACGKIFSTFQ 420 GLGGHRSIHK EKNIVIKDES SHSDAVAAEE NNSFNSSNMH KMEEELLNEE PLADEACQSS 480 GTKILDFDLN EPYVMED

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MDHKEKDKRE ASDHELESCK EMKRSLLGSC KGEVVESMAD EVIAVKSASP TMRECDICGK  60
IFGSGKALGG HRRSHFQKQQ KKVKVRFTNN QSPKAGDNSN TNNRANCDYD DDGKRVCCIC  120
KKEFPTKNAL FGHMRSHPER SWRGVSPPTH SHKHSYSYSS SYSYSSSLNS DSMEKSKEDH  180
DDDDDCVGVF APDEHHHIDV IDLSKFTSPS WLKKDTRGRK CIGGYEAAET LAYLSAYKYF  240
CGDQSNNRVF PKKDEVQPKS ASALIRHEKR KIGESSSKKQ VKKIKFYMKG ELELVGNKDG  300
AAECYGDGGG GEKVNRCKGL SESGVERVSY MDDEDVGVDV DVDVGEGFDD VNTEVTTTAR  360
VQDHFAERKK VKKMDQKGKS SSKKMVLKSK GKDPECENGS KEKVGGYKCG ACGKIFSTFQ  420
GLGGHRSIHK EKNIVIKDES SHSDAVAAEE NNSFNSSNMH KMEEELLNEE PLADEACQSS  480
GTKILDFDLN EPYVMED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	7e-15	C2H2 family protein