PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX61891.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28259.8 Da PI: 9.9092 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 30 | 78 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr+++ +g+WvAeIr+p++ r+r +lg++ tae+Aa+a+++a++ l+g RDX61891.1 30 FRGVRQRS-WGKWVAEIREPRK---RTRKWLGTYATAEDAARAYDRAALTLYG 78 8****999.**********954...5***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MDHSSSSPQQ TTTPPTNNRK GGPDNNKFRF RGVRQRSWGK WVAEIREPRK RTRKWLGTYA 60 TAEDAARAYD RAALTLYGSR AQLNLQPSAN SSSSSSSSSS SSSSSSSRNS SSTQTLRPLL 120 PRPSAFALTF SAASRFVPTN NTLHHSLQVQ QHRLLSRESD AGAPVWNRTR THLVVKNDND 180 NDNLASNQNQ QHNCMYEDVN SFGVGSSVGS NLSSSLTLTT APVASDNAEL GVVGLGSPFI 240 WPFSTEEDYT TNIDVYEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 5e-32 | ERF family protein |