PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RDX61719.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 353aa MW: 39819.8 Da PI: 7.4046 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.2 | 3.1e-18 | 165 | 265 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 f+k+l++sdv++++r++lpkk ae++ ++++e++ +++ d +g +W++k+++ +++s++yvl+ ++ +Fv+ +gL+ gD+++ + ++ ++ ++v RDX61719.1 165 FQKELKNSDVSSLRRMILPKKAAEAFlpALDSKEGIIMSMDDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGDFVNTHGLRFGDSIMVY--QDiQNNNYV 260 99**************************77788999*********9*******9989999999***9.*****************999..666777777 PP EEEE- CS B3 94 vkvfr 98 +++ r RDX61719.1 261 IQAKR 265 77655 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 353 aa Download sequence |
MMNQRQREKL LHKTETCGLV AGVGAELGIV TGPGDNNNVS SISQSNGSGR IHDDNHLGLV 60 AAVTTFGTVQ RKKRTMTRQR RSTTTNTYPT LLHLNNNKHK PLRFPPLSPS ASSHVPLPSP 120 PPDKPSTTLP QARVSYHPLL FFSNLFLSPL SRSHEIDHRR LRFLFQKELK NSDVSSLRRM 180 ILPKKAAEAF LPALDSKEGI IMSMDDIDGL HVWSFKYRFW PNNNSRMYVL ENTGDFVNTH 240 GLRFGDSIMV YQDIQNNNYV IQAKRASDRD EFMEETSDTI NDIFLSDFEV NKPGCFNVTY 300 PPVNDTGMSF IYDTTFSNDS PLDFLGGSMT NFSRIGPVET FGSVENLSLD DFY |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 71 | 100 | RKKRTMTRQRRSTTTNTYPTLLHLNNNKHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26790.1 | 4e-80 | B3 family protein |