PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61651.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 625aa MW: 68752.9 Da PI: 9.2752

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	56.6	6.8e-18	160	249	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +L+e ++e+ ++l+rg+l++ +Weev++++ e++ e+s +qCk+k++nl+kryk + ++ +++ ++s++ +f+++e RDX61651.1 160 EWSDRAIACLLETYTEKFKELNRGNLRGRDWEEVAEAVgeqcgGEGKHEKSVEQCKNKIDNLKKRYKVELQRIGSG-GIATSHWHWFNNIE 249 5****************************************9************************9999.556669***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MGIMTNKKKK KKQKKKTEGN HTRKKQLTLN RTFDDGNRYS LRHNVVSDSS LLMATEDYPL 60 LDSPSHAQPH LHAPTRHHFP SSSSSSPTTL PASDSVTADY YPHTSFSDDS AGPAKSVQTP 120 NSKRASAAGS PYHYNKKLKP AADPDPAFRG GEDYRKDREE WSDRAIACLL ETYTEKFKEL 180 NRGNLRGRDW EEVAEAVGEQ CGGEGKHEKS VEQCKNKIDN LKKRYKVELQ RIGSGGIATS 240 HWHWFNNIEA IIANSFTVKT LPQHHNPATA AAANSSSMPR QTNNRSYSSN LVILNFCISL 300 TPTTETRFDY CCKLGIVQSF VHDGVTGHAF FVVLACHGVR NKYWNGPLTA SDKSLRRYAN 360 NLKTKPVSNL KWRRVLFKIS GSALSGNCQN IDPKVPVLFL VAMQIAREVA TACRLGVEVA 420 IVVGGRNFFC GDAWVSATGL DRPTAFQIGM MATVMNSILL QSALEKLGVE ARVQSAFSMP 480 EVAEPYSRQR AIRHLEKGRV VIFGGVGVGV GVGTVNPLFT TDTTAALRAS ELNADAVLKG 540 TNVNGVFDCH PRNDNLTIDH ISFREIVSRG VTSMDMMALA YCEENGIPVV VFNMLEPGNV 600 SRALCGDQVG TLIDQTGRVE HQLPS

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MGIMTNKKKK KKQKKKTEGN HTRKKQLTLN RTFDDGNRYS LRHNVVSDSS LLMATEDYPL  60
LDSPSHAQPH LHAPTRHHFP SSSSSSPTTL PASDSVTADY YPHTSFSDDS AGPAKSVQTP  120
NSKRASAAGS PYHYNKKLKP AADPDPAFRG GEDYRKDREE WSDRAIACLL ETYTEKFKEL  180
NRGNLRGRDW EEVAEAVGEQ CGGEGKHEKS VEQCKNKIDN LKKRYKVELQ RIGSGGIATS  240
HWHWFNNIEA IIANSFTVKT LPQHHNPATA AAANSSSMPR QTNNRSYSSN LVILNFCISL  300
TPTTETRFDY CCKLGIVQSF VHDGVTGHAF FVVLACHGVR NKYWNGPLTA SDKSLRRYAN  360
NLKTKPVSNL KWRRVLFKIS GSALSGNCQN IDPKVPVLFL VAMQIAREVA TACRLGVEVA  420
IVVGGRNFFC GDAWVSATGL DRPTAFQIGM MATVMNSILL QSALEKLGVE ARVQSAFSMP  480
EVAEPYSRQR AIRHLEKGRV VIFGGVGVGV GVGTVNPLFT TDTTAALRAS ELNADAVLKG  540
TNVNGVFDCH PRNDNLTIDH ISFREIVSRG VTSMDMMALA YCEENGIPVV VFNMLEPGNV  600
SRALCGDQVG TLIDQTGRVE HQLPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	7	15	KKKKKKQKK
2	7	16	KKKKKKQKKK
3	7	25	KKKKKKQKKKTEGNHTRKK
4	8	26	KKKKKKQKKKTEGNHTRKK
5	9	27	KKKKKKQKKKTEGNHTRKK
6	10	28	KKKKKKQKKKTEGNHTRKK
7	12	25	KQKKKTEGNHTRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-103	Trihelix family protein