PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX61633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NF-YB | ||||||||
Protein Properties | Length: 208aa MW: 23785.8 Da PI: 4.7001 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 113.7 | 9.6e-36 | 36 | 126 | 6 | 96 |
NF-YB 6 rflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +Pi+nv++im+++lP+nakis + ke++q+ ++++++fvt +a ++cq+e rk +n++dllwa+ +lGf+dyv pl+++l++yr eg RDX61633.1 36 TKMPISNVTKIMRQILPTNAKISANVKEMIQQSATKYVTFVTRKAKERCQNEYRKIMNAEDLLWAIEKLGFNDYVGPLTTFLNRYRSNEGS 126 579***********************************************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MLPLQQTNTS AIIETPTPIN PTNNSSVPNL ALRDKTKMPI SNVTKIMRQI LPTNAKISAN 60 VKEMIQQSAT KYVTFVTRKA KERCQNEYRK IMNAEDLLWA IEKLGFNDYV GPLTTFLNRY 120 RSNEGSDLLT RSEESIPHLD NNELNIEHVP NPMPTLEMHH PDISSLVPSL ESNFSIDPNT 180 NMEMFDPNDK DKFFFDEFDV GFSNDESF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 6e-37 | NF-YB family protein |