PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX61557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 316aa MW: 35051.3 Da PI: 8.2779 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.8 | 7.7e-18 | 149 | 203 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k RDX61557.1 149 RKKLRLTKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 203 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 127.2 | 7.3e-41 | 149 | 239 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+keq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk RDX61557.1 149 RKKLRLTKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 239 69*************************************************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MELALSLGDT SKPFTLPTKD TPGFCGRGSD DKRSDAAERK GSSDPPVQLD LLPFTPVLRS 60 QPPSNLRIPW LTQPCGAARA LDVNLFPAAV EDGDDGTSLS SPNSAVSPFQ MDFSMRNGNA 120 AEFGGRNKRE QNDGEGERAS DDDENGSTRK KLRLTKEQSA FLEESFKEHT TLNPKQKLAL 180 AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCET LTEENRRLQK ELQELRALKT 240 SQPFYMQLPA TTLTMCPSCE RVATNSTTAN QTSTVNINNN ASQIPVELSL SKPRILPFPN 300 AQAQSPKAQA HQIASS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 154 | TRKKLRL |
2 | 198 | 206 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 9e-71 | HD-ZIP family protein |