PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX61165.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 405aa MW: 45311.2 Da PI: 8.2185

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX61165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.3	3.4e-07	236	258	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H RDX61165.1 236 HYCQVCGKGFKRDANLRMHMRAH 258 68*******************99 PP
2	zf-C2H2	10.7	0.0016	326	349	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + RDX61165.1 326 YVCKRCNqKQFSVLSDLRTHEKHC 349 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MISRATSGFQ SVHQELQMFP DPEDLVSPPS VEINSSGSAS HSSSLLFNLS ILKDRLSEVQ 60 TLVSVILSPN QSLPESTSMA ISSMNSTIQE IIVTATSMIF TCQQMALTIP PGTNNNTTTT 120 CTNKLHHQNK LPHSINFGNN RIVLDNIGTD ISSQGLFSST ESEALEWFSE SYDNNNISKI 180 KEDGIDPSVA ISKNNISRGE VSPRDEEGYI NYRELSAKNS DIIELDAEDL LAKYTHYCQV 240 CGKGFKRDAN LRMHMRAHGD EYKTNAALSN PIKNKGRECL MSVKPKRYSC PQEGCRWNQK 300 HAKFQPLKSM ICAKNHYKRS HCPKMYVCKR CNQKQFSVLS DLRTHEKHCG DLKWQCSCGT 360 SFSRKDKLMG HVALFVGHQP AINTNALLYS GTLIRTPHNA NEDRT

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MISRATSGFQ SVHQELQMFP DPEDLVSPPS VEINSSGSAS HSSSLLFNLS ILKDRLSEVQ  60
TLVSVILSPN QSLPESTSMA ISSMNSTIQE IIVTATSMIF TCQQMALTIP PGTNNNTTTT  120
CTNKLHHQNK LPHSINFGNN RIVLDNIGTD ISSQGLFSST ESEALEWFSE SYDNNNISKI  180
KEDGIDPSVA ISKNNISRGE VSPRDEEGYI NYRELSAKNS DIIELDAEDL LAKYTHYCQV  240
CGKGFKRDAN LRMHMRAHGD EYKTNAALSN PIKNKGRECL MSVKPKRYSC PQEGCRWNQK  300
HAKFQPLKSM ICAKNHYKRS HCPKMYVCKR CNQKQFSVLS DLRTHEKHCG DLKWQCSCGT  360
SFSRKDKLMG HVALFVGHQP AINTNALLYS GTLIRTPHNA NEDRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-100	C2H2 family protein