PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX60954.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family SRS
Protein Properties Length: 329aa    MW: 35179.6 Da    PI: 8.4394
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX60954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702184.15.5e-571192867153
      DUF702   7 sCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.....aeaaskrkrelkskkqsalsstklssaeskkel 100
                  CqdCGn+akkdC+++RCRtCCk rg+dC+thvkstWvp+ +rrer  + a a+ +a++ +     +++a+  +++++s+++++ +s  +ss+++    
  RDX60954.1 119 VCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHVKSTWVPSLRRRERDMTVAVATGTAKRPRalvgsSQNATATSHSSNSNATTTPKSLATSSSHQGA-- 215
                 6*********************************************888887766665555445432222222222233333333333333333222.. PP

      DUF702 101 etss....................lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                    s                    lP +v+++avf+c rvs++ +ge+e+aY ++v+i+GhvfkG+Lyd+G++
  RDX60954.1 216 L--SfsfstppmmsfdpyasfkhsLPGHVRAPAVFKCHRVSAIGNGEDEFAYSATVHISGHVFKGFLYDHGVD 286
                 1..13355799************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MSMLGLRDLV LIAPTPSLHQ GQPISENHTP NLPLPSSAAL SVGFGIFPLL TATPCVTTHP  60
QQNNEVQDCG GGAATTNYWN LKMCPQVNPT KKGVINVDDN DKGLMDTEEN GVYGPDFRVC  120
QDCGNRAKKD CVFRRCRTCC KGRGYDCSTH VKSTWVPSLR RRERDMTVAV ATGTAKRPRA  180
LVGSSQNATA TSHSSNSNAT TTPKSLATSS SHQGALSFSF STPPMMSFDP YASFKHSLPG  240
HVRAPAVFKC HRVSAIGNGE DEFAYSATVH ISGHVFKGFL YDHGVDGKIT NAVPCVSELQ  300
LGNNCNGKNR ECSSAIGLPT NNAYPASAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.12e-53SRS family protein