PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX60730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 76aa MW: 8807.08 Da PI: 5.6609 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.2 | 3e-27 | 8 | 76 | 1 | 70 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat 70 lppGfrFhPtdeel+ +yL kkv++ +l++ ++i+evdiyk++PwdLp+k++ +ekewyfFs+rd+ky++ RDX60730.1 8 LPPGFRFHPTDEELILHYLSKKVASIPLPV-SIIAEVDIYKLDPWDLPAKATFGEKEWYFFSPRDRKYPN 76 79****************************.89***************988899*************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence |
MGSPESNLPP GFRFHPTDEE LILHYLSKKV ASIPLPVSII AEVDIYKLDP WDLPAKATFG 60 EKEWYFFSPR DRKYPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-42 | NAC family protein |